Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 TSPY22P-201ENST00000427496 604 ntBASIC14.96□□□□□ -0.01
RFT1Q96AA3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.02
RFT1Q96AA3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFT1Q96AA3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.96□□□□□ -0.02
RFT1Q96AA3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
RFT1Q96AA3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFT1Q96AA3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
RFT1Q96AA3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFT1Q96AA3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RFT1Q96AA3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.96□□□□□ -0.02
RFT1Q96AA3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RFT1Q96AA3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 IGHV3-52-201ENST00000519770 353 ntBASIC14.95□□□□□ -0.02
RFT1Q96AA3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.95□□□□□ -0.02
RFT1Q96AA3 AC019129.2-201ENST00000609837 1235 ntBASIC14.95□□□□□ -0.02
RFT1Q96AA3 AL592071.1-201ENST00000611956 408 ntBASIC14.95□□□□□ -0.02
RFT1Q96AA3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
RFT1Q96AA3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFT1Q96AA3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFT1Q96AA3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFT1Q96AA3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFT1Q96AA3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
RFT1Q96AA3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFT1Q96AA3 AC097374.2-201ENST00000618617 1306 ntBASIC14.94□□□□□ -0.02
RFT1Q96AA3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFT1Q96AA3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RFT1Q96AA3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFT1Q96AA3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFT1Q96AA3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RFT1Q96AA3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.94□□□□□ -0.02
RFT1Q96AA3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.94□□□□□ -0.02
RFT1Q96AA3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
RFT1Q96AA3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFT1Q96AA3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms