Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 ABCD1P5-201ENST00000445663 754 ntBASIC15.15■□□□□ 0.02
PTP4A1Q93096 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 MIR5100-201ENST00000579544 119 ntBASIC15.15■□□□□ 0.02
PTP4A1Q93096 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 AL590787.1-201ENST00000568856 1315 ntBASIC15.15■□□□□ 0.02
PTP4A1Q93096 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 AC006277.1-201ENST00000624348 1610 ntBASIC15.14■□□□□ 0.01
PTP4A1Q93096 AC079776.2-201ENST00000641154 1609 ntBASIC15.14■□□□□ 0.01
PTP4A1Q93096 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 TERC-201ENST00000602385 541 ntBASIC15.14■□□□□ 0.01
PTP4A1Q93096 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 AC013467.2-201ENST00000605472 835 ntBASIC15.14■□□□□ 0.01
PTP4A1Q93096 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 MTHFR-217ENST00000641820 1569 ntBASIC15.14■□□□□ 0.01
PTP4A1Q93096 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTP4A1Q93096 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.14■□□□□ 0.01
PTP4A1Q93096 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTP4A1Q93096 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PTP4A1Q93096 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms