Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S1Q92572 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.87□□□□□ -0.03
AP3S1Q92572 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.87□□□□□ -0.03
AP3S1Q92572 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP3S1Q92572 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AP3S1Q92572 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S1Q92572 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.86□□□□□ -0.03
AP3S1Q92572 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S1Q92572 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
AP3S1Q92572 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AP3S1Q92572 AC007663.1-201ENST00000438948 1240 ntBASIC14.86□□□□□ -0.03
AP3S1Q92572 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
AP3S1Q92572 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
AP3S1Q92572 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S1Q92572 AC111152.3-201ENST00000569699 673 ntBASIC14.86□□□□□ -0.03
AP3S1Q92572 AC019129.2-201ENST00000609837 1235 ntBASIC14.86□□□□□ -0.03
AP3S1Q92572 AC004263.2-201ENST00000617183 678 ntBASIC14.86□□□□□ -0.03
AP3S1Q92572 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.86□□□□□ -0.03
AP3S1Q92572 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
AP3S1Q92572 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.86□□□□□ -0.03
AP3S1Q92572 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AP3S1Q92572 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
AP3S1Q92572 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
AP3S1Q92572 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP3S1Q92572 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.85□□□□□ -0.03
AP3S1Q92572 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.85□□□□□ -0.03
AP3S1Q92572 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.85□□□□□ -0.03
AP3S1Q92572 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.85□□□□□ -0.03
AP3S1Q92572 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 NEK4P2-201ENST00000580004 1012 ntBASIC14.85□□□□□ -0.03
AP3S1Q92572 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.85□□□□□ -0.03
AP3S1Q92572 REXO1L10P-201ENST00000615707 1290 ntBASIC14.85□□□□□ -0.03
AP3S1Q92572 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.85□□□□□ -0.03
AP3S1Q92572 REXO1L12P-201ENST00000622156 912 ntBASIC14.85□□□□□ -0.03
AP3S1Q92572 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.85□□□□□ -0.03
AP3S1Q92572 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.85□□□□□ -0.03
AP3S1Q92572 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.85□□□□□ -0.03
AP3S1Q92572 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.85□□□□□ -0.03
AP3S1Q92572 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 MYO15B-237ENST00000642007 4893 ntBASIC14.85□□□□□ -0.03
AP3S1Q92572 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
AP3S1Q92572 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP3S1Q92572 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP3S1Q92572 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP3S1Q92572 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.85□□□□□ -0.03
AP3S1Q92572 LINC00895-201ENST00000629028 1637 ntBASIC14.84□□□□□ -0.03
AP3S1Q92572 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms