Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 AC074051.2-201ENST00000565115 352 ntBASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 AC092329.2-201ENST00000598402 547 ntBASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 AL603832.2-201ENST00000566195 2125 ntBASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLC44A1Q8WWI5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 AC011270.2-201ENST00000624293 2550 ntBASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 AL512652.2-201ENST00000625156 1716 ntBASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 PRYP5-201ENST00000451909 266 ntBASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC44A1Q8WWI5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 MIR3180-1-201ENST00000580374 94 ntBASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 MIR3180-3-201ENST00000584616 94 ntBASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC44A1Q8WWI5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms