Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 HLA-A-202ENST00000376806 1854 ntBASIC19.74■□□□□ 0.75
STAG1Q8WVM7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 AC254562.1-201ENST00000417586 456 ntBASIC19.74■□□□□ 0.75
STAG1Q8WVM7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 ACTG1P14-201ENST00000446382 1122 ntBASIC19.74■□□□□ 0.75
STAG1Q8WVM7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.74■□□□□ 0.75
STAG1Q8WVM7 AC021097.1-201ENST00000607902 574 ntBASIC19.74■□□□□ 0.75
STAG1Q8WVM7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 PCDHA12-202ENST00000613593 2588 ntBASIC19.74■□□□□ 0.75
STAG1Q8WVM7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
STAG1Q8WVM7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
STAG1Q8WVM7 FLJ38576-201ENST00000623820 2459 ntBASIC19.73■□□□□ 0.75
STAG1Q8WVM7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 AL355306.1-201ENST00000415580 579 ntBASIC19.72■□□□□ 0.75
STAG1Q8WVM7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 SNHG9-202ENST00000564014 471 ntBASIC19.72■□□□□ 0.75
STAG1Q8WVM7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
STAG1Q8WVM7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms