Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 ZNF259P1-201ENST00000407656 1365 ntBASIC17.08■□□□□ 0.32
PTCD2Q8WV60 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 PAWRP1-201ENST00000451083 565 ntBASIC17.08■□□□□ 0.32
PTCD2Q8WV60 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 KRT18P58-201ENST00000527480 1120 ntBASIC17.08■□□□□ 0.32
PTCD2Q8WV60 AC013467.2-201ENST00000605472 835 ntBASIC17.08■□□□□ 0.32
PTCD2Q8WV60 AL139011.1-202ENST00000642063 584 ntBASIC17.08■□□□□ 0.32
PTCD2Q8WV60 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCD2Q8WV60 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 PTCHD3P3-201ENST00000403073 906 ntBASIC17.07■□□□□ 0.32
PTCD2Q8WV60 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 AC023511.2-201ENST00000618803 211 ntBASIC17.07■□□□□ 0.32
PTCD2Q8WV60 MIR1199-201ENST00000621445 119 ntBASIC17.07■□□□□ 0.32
PTCD2Q8WV60 AC005593.1-201ENST00000624894 515 ntBASIC17.07■□□□□ 0.32
PTCD2Q8WV60 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCD2Q8WV60 AL603756.1-201ENST00000606511 2163 ntBASIC17.06■□□□□ 0.32
PTCD2Q8WV60 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 TOP3BP1-201ENST00000420768 1380 ntBASIC17.06■□□□□ 0.32
PTCD2Q8WV60 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 AC108751.1-201ENST00000490852 363 ntBASIC17.06■□□□□ 0.32
PTCD2Q8WV60 RPS15P9-201ENST00000494093 319 ntBASIC17.06■□□□□ 0.32
PTCD2Q8WV60 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms