Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH19Q8TAB3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 RPL13AP23-201ENST00000480739 586 ntBASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 KRT18P58-201ENST00000527480 1120 ntBASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 AC106730.1-201ENST00000566722 1090 ntBASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 CYP2A7P1-201ENST00000595391 815 ntBASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 PCDH8P1-201ENST00000428983 2773 ntBASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDH19Q8TAB3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 AC006449.5-201ENST00000610658 2098 ntBASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH19Q8TAB3 KRT8P39-201ENST00000396270 1433 ntBASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 AC005412.3-201ENST00000580309 715 ntBASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH19Q8TAB3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 AC005052.1-201ENST00000625181 2492 ntBASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms