Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 LINC02560-201ENST00000596379 459 ntBASIC20.57■□□□□ 0.88
RTL9Q8NET4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 AC008761.3-201ENST00000624803 892 ntBASIC20.57■□□□□ 0.88
RTL9Q8NET4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTL9Q8NET4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL9Q8NET4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL9Q8NET4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTL9Q8NET4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL9Q8NET4 HLA-H-201ENST00000383620 1096 ntBASIC20.56■□□□□ 0.88
RTL9Q8NET4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTL9Q8NET4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 AC097493.3-201ENST00000509725 367 ntBASIC20.56■□□□□ 0.88
RTL9Q8NET4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 AC018529.1-201ENST00000613063 361 ntBASIC20.56■□□□□ 0.88
RTL9Q8NET4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTL9Q8NET4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTL9Q8NET4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RTL9Q8NET4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTL9Q8NET4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 AC092068.3-201ENST00000587894 2016 ntBASIC20.55■□□□□ 0.88
RTL9Q8NET4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 PCDHB17P-201ENST00000539533 2393 ntBASIC20.55■□□□□ 0.88
RTL9Q8NET4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL9Q8NET4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL9Q8NET4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 AP002490.2-201ENST00000524791 560 ntBASIC20.55■□□□□ 0.88
RTL9Q8NET4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL9Q8NET4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL9Q8NET4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTL9Q8NET4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.55■□□□□ 0.88
RTL9Q8NET4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.54■□□□□ 0.88
RTL9Q8NET4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 AC063926.2-201ENST00000623766 1308 ntBASIC20.54■□□□□ 0.88
RTL9Q8NET4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 AC090340.1-201ENST00000620778 4980 ntBASIC20.54■□□□□ 0.88
RTL9Q8NET4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.54■□□□□ 0.88
RTL9Q8NET4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RTL9Q8NET4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTL9Q8NET4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 AL023806.1-201ENST00000603994 1649 ntBASIC20.53■□□□□ 0.88
RTL9Q8NET4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 IGHV3-42-201ENST00000520410 361 ntBASIC20.53■□□□□ 0.88
RTL9Q8NET4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms