Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL3Q8N8U3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 KRT8P39-201ENST00000396270 1433 ntBASIC17.21■□□□□ 0.35
RTL3Q8N8U3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.21■□□□□ 0.35
RTL3Q8N8U3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 HLA-A-202ENST00000376806 1854 ntBASIC17.21■□□□□ 0.35
RTL3Q8N8U3 AC006538.1-201ENST00000567905 1585 ntBASIC17.21■□□□□ 0.35
RTL3Q8N8U3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 RNU1-129P-201ENST00000384064 167 ntBASIC17.21■□□□□ 0.35
RTL3Q8N8U3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 AC023274.1-201ENST00000418278 595 ntBASIC17.21■□□□□ 0.35
RTL3Q8N8U3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 U1.21-201ENST00000580816 167 ntBASIC17.21■□□□□ 0.35
RTL3Q8N8U3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL3Q8N8U3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.21■□□□□ 0.34
RTL3Q8N8U3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.21■□□□□ 0.34
RTL3Q8N8U3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTL3Q8N8U3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 AC074386.1-202ENST00000463561 864 ntBASIC17.2■□□□□ 0.34
RTL3Q8N8U3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.2■□□□□ 0.34
RTL3Q8N8U3 AC002347.1-201ENST00000569543 541 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms