Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 MIR1199-201ENST00000621445 119 ntBASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 AC063926.3-201ENST00000624734 5658 ntBASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 FRMD8P1-201ENST00000440433 1524 ntBASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 UNC93B6-202ENST00000528242 690 ntBASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 AC145285.3-201ENST00000564603 959 ntBASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf42Q8N5U0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
C11orf42Q8N5U0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms