Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 IGLL3P-201ENST00000412472 434 ntBASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 YBX1P5-201ENST00000509441 847 ntBASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 AL805961.1-202ENST00000641562 540 ntBASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC33Q8N5R6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 AGGF1P2-201ENST00000426656 2106 ntBASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 AL121761.2-201ENST00000598007 1648 ntBASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 AC004877.2-201ENST00000623941 599 ntBASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 FRMD8P1-201ENST00000440433 1524 ntBASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC33Q8N5R6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms