Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 AC239800.4-201ENST00000603712 296 ntBASIC17.06■□□□□ 0.32
PGBD3Q8N328 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PGBD3Q8N328 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.06■□□□□ 0.32
PGBD3Q8N328 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 AC108860.2-201ENST00000562760 2183 ntBASIC17.05■□□□□ 0.32
PGBD3Q8N328 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 FAM58DP-201ENST00000428076 619 ntBASIC17.05■□□□□ 0.32
PGBD3Q8N328 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 BASP1P1-201ENST00000430708 665 ntBASIC17.05■□□□□ 0.32
PGBD3Q8N328 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.05■□□□□ 0.32
PGBD3Q8N328 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PGBD3Q8N328 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 IGHV3-42-201ENST00000520410 361 ntBASIC17.04■□□□□ 0.32
PGBD3Q8N328 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 AJ011932.1-201ENST00000621707 465 ntBASIC17.04■□□□□ 0.32
PGBD3Q8N328 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.04■□□□□ 0.32
PGBD3Q8N328 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PGBD3Q8N328 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms