Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AP3S2-216ENST00000617003 1561 ntBASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEFF1Q8IYR6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 AC133963.1-201ENST00000504166 1679 ntBASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 OR8S1-201ENST00000310194 1080 ntBASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 NME2P1-201ENST00000426182 414 ntBASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 MPDU1-223ENST00000582151 728 ntBASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 PCDHB18P-201ENST00000524813 2368 ntBASIC16.63■□□□□ 0.25
TMEFF1Q8IYR6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 AC142381.1-201ENST00000426099 345 ntBASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 AL138828.2-201ENST00000615812 383 ntBASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEFF1Q8IYR6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms