Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 NKAPP1-205ENST00000585790 367 ntBASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A2Q8IWA5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 AC097637.2-201ENST00000624096 1997 ntBASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 FGFR3P6-201ENST00000457012 610 ntBASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 AF238378.1-201ENST00000526806 358 ntBASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 AL139288.1-201ENST00000623748 933 ntBASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 DOC2GP-204ENST00000639052 2548 ntBASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
SLC44A2Q8IWA5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 AC008741.2-201ENST00000612792 3115 ntBASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 AL450487.1-201ENST00000426799 995 ntBASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 EMBP1-201ENST00000458200 901 ntBASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 SCARNA2-201ENST00000458748 420 ntBASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC44A2Q8IWA5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms