Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 AC092647.4-201ENST00000457211 535 ntBASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 DUX4L17-201ENST00000557360 1267 ntBASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUDCD3Q8IVD9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 AC007326.2-201ENST00000624224 7579 ntBASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 AK4P3-201ENST00000418260 669 ntBASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 AC083849.1-201ENST00000615227 514 ntBASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 AC103702.1-201ENST00000548801 2630 ntBASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUDCD3Q8IVD9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NUDCD3Q8IVD9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms