Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 ABHD17AP1-201ENST00000358206 933 ntBASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 MIR935-201ENST00000401179 91 ntBASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 PVRIG2P-201ENST00000435460 978 ntBASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 CCR12P-201ENST00000446203 998 ntBASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 PRAL-201ENST00000624952 3286 ntBASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LYSMD2Q8IV50 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 MIR3917-201ENST00000580971 93 ntBASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LYSMD2Q8IV50 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 SSR4P1-203ENST00000599569 2260 ntBASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 RPS2P55-201ENST00000397318 883 ntBASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 AC107956.1-201ENST00000494359 873 ntBASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms