Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 AC099548.2-209ENST00000480264 625 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 AC091167.2-201ENST00000579581 588 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 AC139713.2-201ENST00000641328 2723 ntBASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 AC105021.1-202ENST00000570572 669 ntBASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 TTTY23B-201ENST00000442790 549 ntBASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 RHOQP1-201ENST00000555758 579 ntBASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 AC093004.1-201ENST00000508850 424 ntBASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 AL133215.2-201ENST00000609242 977 ntBASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 PCDHB17P-201ENST00000539533 2393 ntBASIC10.22□□□□□ -0.77
VPS13BQ7Z7G8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 KRT8P44-201ENST00000441609 1350 ntBASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 CDC14C-201ENST00000428251 1719 ntBASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 PRYP6-201ENST00000514804 343 ntBASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 AC015936.2-201ENST00000593177 259 ntBASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VPS13BQ7Z7G8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 CDK2AP2P3-201ENST00000422476 372 ntBASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms