Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 HAUS4P1-201ENST00000406739 1145 ntBASIC11.53□□□□□ -0.56
CSMD3Q7Z407 CSF2RBP1-201ENST00000447905 391 ntBASIC11.53□□□□□ -0.56
CSMD3Q7Z407 AC099548.2-209ENST00000480264 625 ntBASIC11.53□□□□□ -0.56
CSMD3Q7Z407 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 SRD5A3P1-201ENST00000603021 949 ntBASIC11.53□□□□□ -0.56
CSMD3Q7Z407 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 PDIA3P1-201ENST00000471856 1510 ntBASIC11.53□□□□□ -0.56
CSMD3Q7Z407 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CSMD3Q7Z407 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 AC055876.2-201ENST00000531834 546 ntBASIC11.52□□□□□ -0.56
CSMD3Q7Z407 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CSMD3Q7Z407 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 SLC25A1P3-201ENST00000395415 828 ntBASIC11.52□□□□□ -0.57
CSMD3Q7Z407 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 AC061975.2-201ENST00000581722 295 ntBASIC11.52□□□□□ -0.57
CSMD3Q7Z407 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CSMD3Q7Z407 AL035456.1-201ENST00000456064 1369 ntBASIC11.51□□□□□ -0.57
CSMD3Q7Z407 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 AC092068.3-201ENST00000587894 2016 ntBASIC11.51□□□□□ -0.57
CSMD3Q7Z407 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.51□□□□□ -0.57
CSMD3Q7Z407 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 RNA5SP412-201ENST00000516234 123 ntBASIC11.51□□□□□ -0.57
CSMD3Q7Z407 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.51□□□□□ -0.57
CSMD3Q7Z407 AL512361.1-201ENST00000554200 418 ntBASIC11.51□□□□□ -0.57
CSMD3Q7Z407 RHOQP1-201ENST00000555758 579 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms