Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
COPS6Q7L5N1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.09■□□□□ 0.97
COPS6Q7L5N1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 PRYP6-201ENST00000514804 343 ntBASIC21.08■□□□□ 0.97
COPS6Q7L5N1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 RARRES2P9-201ENST00000565168 469 ntBASIC21.08■□□□□ 0.97
COPS6Q7L5N1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.08■□□□□ 0.97
COPS6Q7L5N1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COPS6Q7L5N1 AC073439.1-201ENST00000624121 1774 ntBASIC21.08■□□□□ 0.96
COPS6Q7L5N1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.07■□□□□ 0.96
COPS6Q7L5N1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms