Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
HIST2H3AQ71DI3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HIST2H3AQ71DI3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
HIST2H3AQ71DI3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST2H3AQ71DI3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST2H3AQ71DI3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST2H3AQ71DI3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST2H3AQ71DI3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST2H3AQ71DI3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST2H3AQ71DI3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 AL603756.1-201ENST00000606511 2163 ntBASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 HLA-A-202ENST00000376806 1854 ntBASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 RPS2P1-201ENST00000434010 821 ntBASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 HLA-J-202ENST00000469281 1241 ntBASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HIST2H3AQ71DI3 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 PI4KAP1-204ENST00000612579 1703 ntBASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AL596257.1-201ENST00000641463 2694 ntBASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 PCDHA14-201ENST00000506751 2298 ntBASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 FAM197Y8-203ENST00000450145 560 ntBASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 RPS15P9-201ENST00000494093 319 ntBASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 SLC25A6P2-201ENST00000497974 877 ntBASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 MIR4492-201ENST00000581627 80 ntBASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AL691432.3-201ENST00000621860 400 ntBASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AC008735.5-201ENST00000623544 497 ntBASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST2H3AQ71DI3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms