Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 AC124947.2-201ENST00000547118 1133 ntBASIC17.89■□□□□ 0.45
VSTM1Q6UX27 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 AL078644.1-201ENST00000609881 752 ntBASIC17.89■□□□□ 0.45
VSTM1Q6UX27 AC134684.3-201ENST00000641758 218 ntBASIC17.89■□□□□ 0.45
VSTM1Q6UX27 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSTM1Q6UX27 AL353732.1-201ENST00000569618 1459 ntBASIC17.88■□□□□ 0.45
VSTM1Q6UX27 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 ELL2P1-201ENST00000413990 1906 ntBASIC17.88■□□□□ 0.45
VSTM1Q6UX27 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 AP006288.1-201ENST00000446065 395 ntBASIC17.88■□□□□ 0.45
VSTM1Q6UX27 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 DUX4L17-201ENST00000557360 1267 ntBASIC17.88■□□□□ 0.45
VSTM1Q6UX27 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 AC091167.2-201ENST00000579581 588 ntBASIC17.88■□□□□ 0.45
VSTM1Q6UX27 MIR4469-201ENST00000583919 79 ntBASIC17.88■□□□□ 0.45
VSTM1Q6UX27 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 AL021920.2-201ENST00000624828 1351 ntBASIC17.88■□□□□ 0.45
VSTM1Q6UX27 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VSTM1Q6UX27 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 FAM58CP-201ENST00000435741 640 ntBASIC17.87■□□□□ 0.45
VSTM1Q6UX27 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 AP002472.1-201ENST00000577490 586 ntBASIC17.87■□□□□ 0.45
VSTM1Q6UX27 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 AC091812.2-201ENST00000619081 385 ntBASIC17.87■□□□□ 0.45
VSTM1Q6UX27 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.87■□□□□ 0.45
VSTM1Q6UX27 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VSTM1Q6UX27 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms