Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C11orf88Q6PI97 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 AC005052.1-201ENST00000625181 2492 ntBASIC14.75□□□□□ -0.05
C11orf88Q6PI97 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 HBZP1-201ENST00000354915 429 ntBASIC14.75□□□□□ -0.05
C11orf88Q6PI97 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 AL645929.1-201ENST00000420084 975 ntBASIC14.75□□□□□ -0.05
C11orf88Q6PI97 SPDYE15P-201ENST00000424157 909 ntBASIC14.75□□□□□ -0.05
C11orf88Q6PI97 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
C11orf88Q6PI97 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 AC023824.1-201ENST00000562945 2975 ntBASIC14.74□□□□□ -0.05
C11orf88Q6PI97 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 ATP5G2P1-201ENST00000433580 426 ntBASIC14.74□□□□□ -0.05
C11orf88Q6PI97 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.74□□□□□ -0.05
C11orf88Q6PI97 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.74□□□□□ -0.05
C11orf88Q6PI97 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C11orf88Q6PI97 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms