Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 SLC22A20-204ENST00000530038 1673 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AL450487.1-201ENST00000426799 995 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 PMS2P1-201ENST00000431037 1228 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 HLA-J-202ENST00000469281 1241 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AC105339.3-201ENST00000560043 636 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AL356488.2-201ENST00000602755 427 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AL139011.1-202ENST00000642063 584 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AC006449.5-201ENST00000610658 2098 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 AL671710.1-201ENST00000610245 2349 ntBASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF549Q6P9A3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 AF186996.4-201ENST00000467186 377 ntBASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 IGHV3-65-201ENST00000523210 341 ntBASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 AL049840.3-201ENST00000602669 611 ntBASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 FAM215A-202ENST00000632077 792 ntBASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ZNF549Q6P9A3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF549Q6P9A3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms