Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 ATP5G2P1-201ENST00000433580 426 ntBASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 MIR3652-201ENST00000579335 131 ntBASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 AC068418.2-201ENST00000577309 3703 ntBASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP4R4Q6NUP7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 KRT18P65-201ENST00000439811 1286 ntBASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 AC074051.2-201ENST00000565115 352 ntBASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 AC012313.10-201ENST00000623509 926 ntBASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PPP4R4Q6NUP7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 AP002383.4-201ENST00000442518 975 ntBASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 MINOS1P3-201ENST00000457048 203 ntBASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 AC104819.1-201ENST00000504587 486 ntBASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 AC113404.2-201ENST00000507884 177 ntBASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PPP4R4Q6NUP7 Z69720.1-201ENST00000601483 472 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms