Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 AL136379.1-201ENST00000623471 2642 ntBASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 AC211429.1-201ENST00000415277 523 ntBASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 AL845331.1-201ENST00000424978 1190 ntBASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 AC063952.2-201ENST00000498792 1227 ntBASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 KRT8P26-201ENST00000534154 1276 ntBASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 AC073592.5-201ENST00000624854 528 ntBASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 HLA-A-202ENST00000376806 1854 ntBASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LCN1P1Q5VSP4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 AL662844.4-201ENST00000606367 2838 ntBASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P1Q5VSP4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms