Protein–RNA interactions for Protein: Q4ZHG4

FNDC1, Fibronectin type III domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1Q4ZHG4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 AC006277.1-201ENST00000624348 1610 ntBASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 AC087499.5-201ENST00000452760 1342 ntBASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC1Q4ZHG4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 AL035456.1-201ENST00000456064 1369 ntBASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC1Q4ZHG4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 CR383656.12-201ENST00000549567 513 ntBASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 AC009407.1-201ENST00000568958 598 ntBASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 AC105021.1-202ENST00000570572 669 ntBASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC1Q4ZHG4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
FNDC1Q4ZHG4 SLC7A15P-201ENST00000424028 1363 ntBASIC17.71■□□□□ 0.42
FNDC1Q4ZHG4 KRT8P12-202ENST00000472924 1397 ntBASIC17.71■□□□□ 0.42
FNDC1Q4ZHG4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.71■□□□□ 0.42
FNDC1Q4ZHG4 PCDHB17P-201ENST00000539533 2393 ntBASIC17.71■□□□□ 0.42
FNDC1Q4ZHG4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 AC080080.1-201ENST00000625121 2420 ntBASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
FNDC1Q4ZHG4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms