Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 HMGA1P7-201ENST00000406908 502 ntBASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 AL513480.1-201ENST00000451731 511 ntBASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 ALOX12P2-203ENST00000570921 1945 ntBASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 GGT4P-201ENST00000623672 1708 ntBASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPN20Q4JDL3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 AL031731.1-201ENST00000642131 2094 ntBASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 AP001350.2-201ENST00000625104 1094 ntBASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 ZNF259P1-201ENST00000407656 1365 ntBASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 PCDHB19P-201ENST00000570871 2371 ntBASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN20Q4JDL3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
PTPN20Q4JDL3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.64■□□□□ 0.42
PTPN20Q4JDL3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms