Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDR2Q01850 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CDR2Q01850 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.93■□□□□ 0.46
CDR2Q01850 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.93■□□□□ 0.46
CDR2Q01850 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CDR2Q01850 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDR2Q01850 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.93■□□□□ 0.46
CDR2Q01850 IGHV3-65-201ENST00000523210 341 ntBASIC17.93■□□□□ 0.46
CDR2Q01850 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.93■□□□□ 0.46
CDR2Q01850 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.93■□□□□ 0.46
CDR2Q01850 MIR1199-201ENST00000621445 119 ntBASIC17.93■□□□□ 0.46
CDR2Q01850 AC148477.8-201ENST00000624298 468 ntBASIC17.93■□□□□ 0.46
CDR2Q01850 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.93■□□□□ 0.46
CDR2Q01850 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDR2Q01850 AP002414.3-201ENST00000589352 1468 ntBASIC17.93■□□□□ 0.46
CDR2Q01850 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDR2Q01850 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.93■□□□□ 0.46
CDR2Q01850 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.93■□□□□ 0.46
CDR2Q01850 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.93■□□□□ 0.46
CDR2Q01850 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDR2Q01850 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.92■□□□□ 0.46
CDR2Q01850 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 AL450487.1-201ENST00000426799 995 ntBASIC17.92■□□□□ 0.46
CDR2Q01850 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.92■□□□□ 0.46
CDR2Q01850 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.92■□□□□ 0.46
CDR2Q01850 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.92■□□□□ 0.46
CDR2Q01850 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDR2Q01850 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CDR2Q01850 AC046158.3-201ENST00000624947 2558 ntBASIC17.92■□□□□ 0.46
CDR2Q01850 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 SLC22A20-204ENST00000530038 1673 ntBASIC17.92■□□□□ 0.46
CDR2Q01850 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
CDR2Q01850 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.92■□□□□ 0.46
CDR2Q01850 AC131009.4-201ENST00000624048 1740 ntBASIC17.92■□□□□ 0.46
CDR2Q01850 ALOX12P2-203ENST00000570921 1945 ntBASIC17.92■□□□□ 0.46
CDR2Q01850 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 AC008894.3-201ENST00000624324 3103 ntBASIC17.92■□□□□ 0.46
CDR2Q01850 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDR2Q01850 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDR2Q01850 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.91■□□□□ 0.46
CDR2Q01850 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CDR2Q01850 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDR2Q01850 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 AC006449.5-201ENST00000610658 2098 ntBASIC17.91■□□□□ 0.46
CDR2Q01850 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.91■□□□□ 0.46
CDR2Q01850 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 RPS2P28-201ENST00000314255 741 ntBASIC17.91■□□□□ 0.46
CDR2Q01850 AC004870.1-201ENST00000315132 882 ntBASIC17.91■□□□□ 0.46
CDR2Q01850 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.91■□□□□ 0.46
CDR2Q01850 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.91■□□□□ 0.46
CDR2Q01850 PMS2P1-201ENST00000431037 1228 ntBASIC17.91■□□□□ 0.46
CDR2Q01850 FAAHP1-202ENST00000446499 1238 ntBASIC17.91■□□□□ 0.46
CDR2Q01850 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.91■□□□□ 0.46
CDR2Q01850 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.91■□□□□ 0.46
CDR2Q01850 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.91■□□□□ 0.46
CDR2Q01850 AL031008.1-201ENST00000619963 541 ntBASIC17.91■□□□□ 0.46
CDR2Q01850 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.91■□□□□ 0.46
CDR2Q01850 PGM5P2-202ENST00000637225 1043 ntBASIC17.91■□□□□ 0.46
CDR2Q01850 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.91■□□□□ 0.46
CDR2Q01850 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDR2Q01850 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms