Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTRA3P83110 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTRA3P83110 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTRA3P83110 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTRA3P83110 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.18■□□□□ 0.66
HTRA3P83110 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
HTRA3P83110 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HTRA3P83110 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HTRA3P83110 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.18■□□□□ 0.66
HTRA3P83110 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.18■□□□□ 0.66
HTRA3P83110 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.18■□□□□ 0.66
HTRA3P83110 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.18■□□□□ 0.66
HTRA3P83110 Z93015.1-201ENST00000451718 390 ntBASIC19.18■□□□□ 0.66
HTRA3P83110 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.18■□□□□ 0.66
HTRA3P83110 AC106760.1-201ENST00000508690 800 ntBASIC19.18■□□□□ 0.66
HTRA3P83110 PTK2-225ENST00000520892 571 ntTSL 4 BASIC19.18■□□□□ 0.66
HTRA3P83110 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.18■□□□□ 0.66
HTRA3P83110 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.18■□□□□ 0.66
HTRA3P83110 AP006547.1-201ENST00000563435 692 ntBASIC19.18■□□□□ 0.66
HTRA3P83110 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.18■□□□□ 0.66
HTRA3P83110 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.18■□□□□ 0.66
HTRA3P83110 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HTRA3P83110 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HTRA3P83110 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HTRA3P83110 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HTRA3P83110 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTRA3P83110 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.18■□□□□ 0.66
HTRA3P83110 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.17■□□□□ 0.66
HTRA3P83110 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HTRA3P83110 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.17■□□□□ 0.66
HTRA3P83110 AC245884.6-201ENST00000515672 1067 ntBASIC19.17■□□□□ 0.66
HTRA3P83110 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HTRA3P83110 IQSEC3P1-201ENST00000538799 536 ntBASIC19.17■□□□□ 0.66
HTRA3P83110 KRT90P-201ENST00000549264 1064 ntBASIC19.17■□□□□ 0.66
HTRA3P83110 MIR4741-201ENST00000579822 90 ntBASIC19.17■□□□□ 0.66
HTRA3P83110 EEF1DP1-201ENST00000585891 896 ntBASIC19.17■□□□□ 0.66
HTRA3P83110 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.17■□□□□ 0.66
HTRA3P83110 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.17■□□□□ 0.66
HTRA3P83110 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.17■□□□□ 0.66
HTRA3P83110 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
HTRA3P83110 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HTRA3P83110 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.17■□□□□ 0.66
HTRA3P83110 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HTRA3P83110 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HTRA3P83110 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
HTRA3P83110 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.17■□□□□ 0.66
HTRA3P83110 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HTRA3P83110 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.17■□□□□ 0.66
HTRA3P83110 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.16■□□□□ 0.66
HTRA3P83110 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HTRA3P83110 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HTRA3P83110 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.16■□□□□ 0.66
HTRA3P83110 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.16■□□□□ 0.66
HTRA3P83110 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HTRA3P83110 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
HTRA3P83110 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 AL442647.2-201ENST00000429864 857 ntBASIC19.16■□□□□ 0.66
HTRA3P83110 AC004898.1-201ENST00000451057 766 ntBASIC19.16■□□□□ 0.66
HTRA3P83110 AC104784.1-201ENST00000473096 294 ntBASIC19.16■□□□□ 0.66
HTRA3P83110 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.16■□□□□ 0.66
HTRA3P83110 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.16■□□□□ 0.66
HTRA3P83110 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HTRA3P83110 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.16■□□□□ 0.66
HTRA3P83110 AL049840.4-201ENST00000602422 811 ntBASIC19.16■□□□□ 0.66
HTRA3P83110 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms