Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.22■□□□□ 0.51
SNRPFP62306 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SNRPFP62306 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.22■□□□□ 0.51
SNRPFP62306 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SNRPFP62306 MIR574-201ENST00000385209 96 ntBASIC18.22■□□□□ 0.51
SNRPFP62306 AL022342.1-201ENST00000400363 863 ntBASIC18.22■□□□□ 0.51
SNRPFP62306 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SNRPFP62306 AC092474.2-201ENST00000424288 719 ntBASIC18.22■□□□□ 0.51
SNRPFP62306 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.22■□□□□ 0.51
SNRPFP62306 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.22■□□□□ 0.51
SNRPFP62306 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SNRPFP62306 AC018845.2-201ENST00000568326 409 ntBASIC18.22■□□□□ 0.51
SNRPFP62306 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SNRPFP62306 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.22■□□□□ 0.51
SNRPFP62306 AL009183.1-201ENST00000603760 355 ntBASIC18.22■□□□□ 0.51
SNRPFP62306 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 LINC01144-201ENST00000626198 1710 ntBASIC18.22■□□□□ 0.51
SNRPFP62306 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
SNRPFP62306 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.22■□□□□ 0.51
SNRPFP62306 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SNRPFP62306 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.22■□□□□ 0.51
SNRPFP62306 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SNRPFP62306 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SNRPFP62306 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SNRPFP62306 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRPFP62306 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.21■□□□□ 0.51
SNRPFP62306 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.21■□□□□ 0.51
SNRPFP62306 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SNRPFP62306 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.21■□□□□ 0.51
SNRPFP62306 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.21■□□□□ 0.51
SNRPFP62306 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.21■□□□□ 0.51
SNRPFP62306 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
SNRPFP62306 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.21■□□□□ 0.51
SNRPFP62306 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.21■□□□□ 0.51
SNRPFP62306 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.21■□□□□ 0.51
SNRPFP62306 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.21■□□□□ 0.51
SNRPFP62306 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
SNRPFP62306 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
SNRPFP62306 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.21■□□□□ 0.51
SNRPFP62306 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNRPFP62306 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRPFP62306 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRPFP62306 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNRPFP62306 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SNRPFP62306 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRPFP62306 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNRPFP62306 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNRPFP62306 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SNRPFP62306 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRPFP62306 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRPFP62306 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNRPFP62306 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNRPFP62306 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.2■□□□□ 0.5
SNRPFP62306 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.2■□□□□ 0.5
SNRPFP62306 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.2■□□□□ 0.5
SNRPFP62306 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.2■□□□□ 0.5
SNRPFP62306 AC040169.1-201ENST00000565382 521 ntBASIC18.2■□□□□ 0.5
SNRPFP62306 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.2■□□□□ 0.5
SNRPFP62306 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SNRPFP62306 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.2■□□□□ 0.5
SNRPFP62306 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms