Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC11.88□□□□□ -0.51
CKS1BP61024 AC113410.3-201ENST00000623366 203 ntBASIC11.88□□□□□ -0.51
CKS1BP61024 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.88□□□□□ -0.51
CKS1BP61024 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CKS1BP61024 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CKS1BP61024 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS1BP61024 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS1BP61024 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CKS1BP61024 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
CKS1BP61024 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS1BP61024 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS1BP61024 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC11.87□□□□□ -0.51
CKS1BP61024 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS1BP61024 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC11.87□□□□□ -0.51
CKS1BP61024 AC233702.5-201ENST00000584107 538 ntBASIC11.87□□□□□ -0.51
CKS1BP61024 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS1BP61024 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
CKS1BP61024 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS1BP61024 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CKS1BP61024 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS1BP61024 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS1BP61024 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS1BP61024 LINC00304-203ENST00000565008 1864 ntBASIC11.87□□□□□ -0.51
CKS1BP61024 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS1BP61024 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS1BP61024 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 AC092338.2-201ENST00000568827 1415 ntBASIC11.86□□□□□ -0.51
CKS1BP61024 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.86□□□□□ -0.51
CKS1BP61024 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
CKS1BP61024 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
CKS1BP61024 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CKS1BP61024 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.86□□□□□ -0.51
CKS1BP61024 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.86□□□□□ -0.51
CKS1BP61024 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CKS1BP61024 AC128688.1-201ENST00000487626 519 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms