Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.7■□□□□ 0.74
RHBDL3P58872 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
RHBDL3P58872 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.7■□□□□ 0.74
RHBDL3P58872 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RHBDL3P58872 AC098859.1-201ENST00000502915 1238 ntBASIC19.7■□□□□ 0.74
RHBDL3P58872 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.7■□□□□ 0.74
RHBDL3P58872 AL138828.2-201ENST00000615812 383 ntBASIC19.7■□□□□ 0.74
RHBDL3P58872 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.7■□□□□ 0.74
RHBDL3P58872 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RHBDL3P58872 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.7■□□□□ 0.74
RHBDL3P58872 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.7■□□□□ 0.74
RHBDL3P58872 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RHBDL3P58872 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RHBDL3P58872 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.69■□□□□ 0.74
RHBDL3P58872 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.69■□□□□ 0.74
RHBDL3P58872 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.69■□□□□ 0.74
RHBDL3P58872 AC241585.1-201ENST00000433527 519 ntBASIC19.69■□□□□ 0.74
RHBDL3P58872 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RHBDL3P58872 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.69■□□□□ 0.74
RHBDL3P58872 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.69■□□□□ 0.74
RHBDL3P58872 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RHBDL3P58872 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.69■□□□□ 0.74
RHBDL3P58872 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.69■□□□□ 0.74
RHBDL3P58872 AC027369.6-201ENST00000525520 931 ntBASIC19.69■□□□□ 0.74
RHBDL3P58872 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
RHBDL3P58872 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.69■□□□□ 0.74
RHBDL3P58872 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.69■□□□□ 0.74
RHBDL3P58872 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RHBDL3P58872 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RHBDL3P58872 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RHBDL3P58872 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.69■□□□□ 0.74
RHBDL3P58872 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.69■□□□□ 0.74
RHBDL3P58872 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RHBDL3P58872 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.69■□□□□ 0.74
RHBDL3P58872 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDL3P58872 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RHBDL3P58872 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.68■□□□□ 0.74
RHBDL3P58872 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.68■□□□□ 0.74
RHBDL3P58872 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.68■□□□□ 0.74
RHBDL3P58872 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.68■□□□□ 0.74
RHBDL3P58872 AP002490.2-201ENST00000524791 560 ntBASIC19.68■□□□□ 0.74
RHBDL3P58872 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.68■□□□□ 0.74
RHBDL3P58872 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.68■□□□□ 0.74
RHBDL3P58872 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDL3P58872 PCDHB18P-201ENST00000524813 2368 ntBASIC19.68■□□□□ 0.74
RHBDL3P58872 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RHBDL3P58872 AL031731.1-201ENST00000642131 2094 ntBASIC19.67■□□□□ 0.74
RHBDL3P58872 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDL3P58872 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms