Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDH4P55283 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDH4P55283 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH4P55283 AL355306.1-201ENST00000415580 579 ntBASIC17.14■□□□□ 0.33
CDH4P55283 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH4P55283 AL671277.1-201ENST00000429656 993 ntBASIC17.14■□□□□ 0.33
CDH4P55283 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDH4P55283 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDH4P55283 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH4P55283 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDH4P55283 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH4P55283 RARRES2P8-201ENST00000566335 367 ntBASIC17.14■□□□□ 0.33
CDH4P55283 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CDH4P55283 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH4P55283 AC134684.3-201ENST00000641758 218 ntBASIC17.14■□□□□ 0.33
CDH4P55283 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH4P55283 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH4P55283 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDH4P55283 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH4P55283 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDH4P55283 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.14■□□□□ 0.33
CDH4P55283 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH4P55283 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDH4P55283 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH4P55283 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH4P55283 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDH4P55283 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CDH4P55283 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CDH4P55283 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH4P55283 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH4P55283 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH4P55283 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH4P55283 ADH5P3-201ENST00000433842 1137 ntBASIC17.13■□□□□ 0.33
CDH4P55283 AP006288.1-201ENST00000446065 395 ntBASIC17.13■□□□□ 0.33
CDH4P55283 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CDH4P55283 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.13■□□□□ 0.33
CDH4P55283 HLA-J-202ENST00000469281 1241 ntBASIC17.13■□□□□ 0.33
CDH4P55283 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH4P55283 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDH4P55283 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
CDH4P55283 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDH4P55283 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH4P55283 AL691403.2-201ENST00000618460 490 ntBASIC17.13■□□□□ 0.33
CDH4P55283 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH4P55283 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
CDH4P55283 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH4P55283 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH4P55283 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH4P55283 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDH4P55283 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH4P55283 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH4P55283 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDH4P55283 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH4P55283 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 AL603756.1-201ENST00000606511 2163 ntBASIC17.12■□□□□ 0.33
CDH4P55283 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDH4P55283 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDH4P55283 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH4P55283 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms