Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.38■■□□□ 1.01
BRPF1P55201 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.38■■□□□ 1.01
BRPF1P55201 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.38■■□□□ 1.01
BRPF1P55201 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.38■■□□□ 1.01
BRPF1P55201 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRPF1P55201 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.38■■□□□ 1.01
BRPF1P55201 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRPF1P55201 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
BRPF1P55201 AC092171.3-201ENST00000610122 2651 ntBASIC21.38■■□□□ 1.01
BRPF1P55201 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRPF1P55201 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRPF1P55201 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRPF1P55201 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRPF1P55201 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.37■■□□□ 1.01
BRPF1P55201 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.37■■□□□ 1.01
BRPF1P55201 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
BRPF1P55201 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.37■■□□□ 1.01
BRPF1P55201 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC21.37■■□□□ 1.01
BRPF1P55201 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 MIR770-201ENST00000390219 98 ntBASIC21.37■■□□□ 1.01
BRPF1P55201 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 AL513480.1-201ENST00000451731 511 ntBASIC21.37■■□□□ 1.01
BRPF1P55201 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.37■■□□□ 1.01
BRPF1P55201 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.37■■□□□ 1.01
BRPF1P55201 AC023141.13-201ENST00000604991 943 ntBASIC21.37■■□□□ 1.01
BRPF1P55201 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.37■■□□□ 1.01
BRPF1P55201 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
BRPF1P55201 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRPF1P55201 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC21.37■■□□□ 1.01
BRPF1P55201 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.37■■□□□ 1.01
BRPF1P55201 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
BRPF1P55201 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.36■■□□□ 1.01
BRPF1P55201 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
BRPF1P55201 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
BRPF1P55201 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.36■■□□□ 1.01
BRPF1P55201 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.36■■□□□ 1.01
BRPF1P55201 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.36■■□□□ 1.01
BRPF1P55201 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 YBX1P5-201ENST00000509441 847 ntBASIC21.36■■□□□ 1.01
BRPF1P55201 AC109635.5-201ENST00000533593 962 ntBASIC21.36■■□□□ 1.01
BRPF1P55201 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 KRT19P2-202ENST00000557173 1012 ntBASIC21.36■■□□□ 1.01
BRPF1P55201 AC007064.4-201ENST00000637740 555 ntBASIC21.36■■□□□ 1.01
BRPF1P55201 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
BRPF1P55201 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
BRPF1P55201 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.36■■□□□ 1.01
BRPF1P55201 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.36■■□□□ 1.01
BRPF1P55201 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.36■■□□□ 1.01
BRPF1P55201 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRPF1P55201 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BRPF1P55201 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BRPF1P55201 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.35■■□□□ 1.01
BRPF1P55201 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
BRPF1P55201 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.35■■□□□ 1.01
BRPF1P55201 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.35■■□□□ 1.01
BRPF1P55201 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.35■■□□□ 1.01
BRPF1P55201 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BRPF1P55201 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BRPF1P55201 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BRPF1P55201 PMS2P4-201ENST00000412466 1052 ntBASIC21.35■■□□□ 1.01
BRPF1P55201 AC254562.1-201ENST00000417586 456 ntBASIC21.35■■□□□ 1.01
BRPF1P55201 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.35■■□□□ 1.01
BRPF1P55201 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.35■■□□□ 1.01
BRPF1P55201 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.35■■□□□ 1.01
BRPF1P55201 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.35■■□□□ 1.01
BRPF1P55201 AC005829.1-201ENST00000570002 483 ntBASIC21.35■■□□□ 1.01
BRPF1P55201 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.35■■□□□ 1.01
BRPF1P55201 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
BRPF1P55201 AC004877.2-201ENST00000623941 599 ntBASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms