Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PMS1P54277 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 AP002414.3-201ENST00000589352 1468 ntBASIC18.5■□□□□ 0.55
PMS1P54277 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
PMS1P54277 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 AC131009.4-201ENST00000624048 1740 ntBASIC18.49■□□□□ 0.55
PMS1P54277 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PMS1P54277 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.49■□□□□ 0.55
PMS1P54277 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 OR6D1P-202ENST00000641007 5290 ntBASIC18.49■□□□□ 0.55
PMS1P54277 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.49■□□□□ 0.55
PMS1P54277 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.49■□□□□ 0.55
PMS1P54277 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.49■□□□□ 0.55
PMS1P54277 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PMS1P54277 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.49■□□□□ 0.55
PMS1P54277 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.49■□□□□ 0.55
PMS1P54277 FAM197Y8-203ENST00000450145 560 ntBASIC18.49■□□□□ 0.55
PMS1P54277 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.49■□□□□ 0.55
PMS1P54277 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.49■□□□□ 0.55
PMS1P54277 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.49■□□□□ 0.55
PMS1P54277 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.49■□□□□ 0.55
PMS1P54277 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.49■□□□□ 0.55
PMS1P54277 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.49■□□□□ 0.55
PMS1P54277 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.49■□□□□ 0.55
PMS1P54277 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PMS1P54277 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.49■□□□□ 0.55
PMS1P54277 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.49■□□□□ 0.55
PMS1P54277 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PMS1P54277 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.48■□□□□ 0.55
PMS1P54277 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
PMS1P54277 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.48■□□□□ 0.55
PMS1P54277 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
PMS1P54277 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
PMS1P54277 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.48■□□□□ 0.55
PMS1P54277 AC073648.2-201ENST00000510116 352 ntBASIC18.48■□□□□ 0.55
PMS1P54277 AC136632.2-201ENST00000512891 861 ntBASIC18.48■□□□□ 0.55
PMS1P54277 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.48■□□□□ 0.55
PMS1P54277 AL121912.1-201ENST00000603683 238 ntBASIC18.48■□□□□ 0.55
PMS1P54277 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.48■□□□□ 0.55
PMS1P54277 AC008735.5-201ENST00000623544 497 ntBASIC18.48■□□□□ 0.55
PMS1P54277 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.48■□□□□ 0.55
PMS1P54277 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.48■□□□□ 0.55
PMS1P54277 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PMS1P54277 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PMS1P54277 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PMS1P54277 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.48■□□□□ 0.55
PMS1P54277 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.47■□□□□ 0.55
PMS1P54277 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.47■□□□□ 0.55
PMS1P54277 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 AC008894.3-201ENST00000624324 3103 ntBASIC18.47■□□□□ 0.55
PMS1P54277 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PMS1P54277 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.47■□□□□ 0.55
PMS1P54277 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.47■□□□□ 0.55
PMS1P54277 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.47■□□□□ 0.55
PMS1P54277 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.47■□□□□ 0.55
PMS1P54277 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.47■□□□□ 0.55
PMS1P54277 OR7E47P-204ENST00000575924 449 ntBASIC18.47■□□□□ 0.55
PMS1P54277 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms