Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.73■□□□□ 0.27
NUBP1P53384 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.72■□□□□ 0.27
NUBP1P53384 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
NUBP1P53384 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NUBP1P53384 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NUBP1P53384 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NUBP1P53384 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 PFN1P12-201ENST00000455938 534 ntBASIC16.72■□□□□ 0.27
NUBP1P53384 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC16.72■□□□□ 0.27
NUBP1P53384 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.72■□□□□ 0.27
NUBP1P53384 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 MTND4LP31-201ENST00000514859 294 ntBASIC16.72■□□□□ 0.27
NUBP1P53384 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.72■□□□□ 0.27
NUBP1P53384 TPRX2P-201ENST00000535362 881 ntBASIC16.72■□□□□ 0.27
NUBP1P53384 AC123567.1-201ENST00000548294 1261 ntBASIC16.72■□□□□ 0.27
NUBP1P53384 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.72■□□□□ 0.27
NUBP1P53384 AC098617.1-207ENST00000594591 810 ntTSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 SRD5A3P1-201ENST00000603021 949 ntBASIC16.72■□□□□ 0.27
NUBP1P53384 AL133215.2-201ENST00000609242 977 ntBASIC16.72■□□□□ 0.27
NUBP1P53384 AC012653.2-201ENST00000621880 420 ntBASIC16.72■□□□□ 0.27
NUBP1P53384 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.72■□□□□ 0.27
NUBP1P53384 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.72■□□□□ 0.27
NUBP1P53384 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.72■□□□□ 0.27
NUBP1P53384 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NUBP1P53384 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUBP1P53384 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.71■□□□□ 0.27
NUBP1P53384 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NUBP1P53384 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NUBP1P53384 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.71■□□□□ 0.27
NUBP1P53384 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC16.71■□□□□ 0.27
NUBP1P53384 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.71■□□□□ 0.27
NUBP1P53384 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC16.71■□□□□ 0.27
NUBP1P53384 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.71■□□□□ 0.27
NUBP1P53384 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.71■□□□□ 0.27
NUBP1P53384 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.71■□□□□ 0.27
NUBP1P53384 RNU6-467P-201ENST00000517027 110 ntBASIC16.71■□□□□ 0.27
NUBP1P53384 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.71■□□□□ 0.27
NUBP1P53384 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.71■□□□□ 0.27
NUBP1P53384 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 OR4A46P-201ENST00000527255 933 ntBASIC16.71■□□□□ 0.27
NUBP1P53384 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC16.71■□□□□ 0.27
NUBP1P53384 AC013731.1-201ENST00000604340 883 ntBASIC16.71■□□□□ 0.27
NUBP1P53384 AL139327.4-201ENST00000612362 153 ntBASIC16.71■□□□□ 0.27
NUBP1P53384 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
NUBP1P53384 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.71■□□□□ 0.27
NUBP1P53384 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.71■□□□□ 0.27
NUBP1P53384 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
NUBP1P53384 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NUBP1P53384 AL096828.2-201ENST00000567259 1965 ntBASIC16.71■□□□□ 0.27
NUBP1P53384 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUBP1P53384 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.71■□□□□ 0.26
NUBP1P53384 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
NUBP1P53384 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.7■□□□□ 0.26
NUBP1P53384 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms