Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.32■□□□□ 0.2
PDX1P52945 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.32■□□□□ 0.2
PDX1P52945 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
PDX1P52945 COX20P2-201ENST00000452636 358 ntBASIC16.32■□□□□ 0.2
PDX1P52945 RN7SL589P-201ENST00000481268 310 ntBASIC16.32■□□□□ 0.2
PDX1P52945 AC069335.1-201ENST00000489972 472 ntBASIC16.32■□□□□ 0.2
PDX1P52945 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.32■□□□□ 0.2
PDX1P52945 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PDX1P52945 FAM86C2P-203ENST00000528684 1004 ntBASIC16.32■□□□□ 0.2
PDX1P52945 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PDX1P52945 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.32■□□□□ 0.2
PDX1P52945 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.32■□□□□ 0.2
PDX1P52945 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.32■□□□□ 0.2
PDX1P52945 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.32■□□□□ 0.2
PDX1P52945 DUX4L27-201ENST00000554796 1261 ntBASIC16.32■□□□□ 0.2
PDX1P52945 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.32■□□□□ 0.2
PDX1P52945 AC243562.1-201ENST00000560672 389 ntBASIC16.32■□□□□ 0.2
PDX1P52945 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.32■□□□□ 0.2
PDX1P52945 AL135744.1-201ENST00000565098 629 ntBASIC16.32■□□□□ 0.2
PDX1P52945 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.32■□□□□ 0.2
PDX1P52945 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.32■□□□□ 0.2
PDX1P52945 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.32■□□□□ 0.2
PDX1P52945 AP001094.4-201ENST00000579008 2176 ntBASIC16.32■□□□□ 0.2
PDX1P52945 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PDX1P52945 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.32■□□□□ 0.2
PDX1P52945 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.32■□□□□ 0.2
PDX1P52945 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDX1P52945 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
PDX1P52945 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PDX1P52945 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDX1P52945 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PDX1P52945 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.31■□□□□ 0.2
PDX1P52945 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.31■□□□□ 0.2
PDX1P52945 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.31■□□□□ 0.2
PDX1P52945 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PDX1P52945 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.31■□□□□ 0.2
PDX1P52945 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.31■□□□□ 0.2
PDX1P52945 FAM58DP-201ENST00000428076 619 ntBASIC16.31■□□□□ 0.2
PDX1P52945 GPS2P2-201ENST00000430745 888 ntBASIC16.31■□□□□ 0.2
PDX1P52945 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.31■□□□□ 0.2
PDX1P52945 AC005237.2-201ENST00000434368 219 ntBASIC16.31■□□□□ 0.2
PDX1P52945 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.31■□□□□ 0.2
PDX1P52945 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.31■□□□□ 0.2
PDX1P52945 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.31■□□□□ 0.2
PDX1P52945 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.31■□□□□ 0.2
PDX1P52945 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.31■□□□□ 0.2
PDX1P52945 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.31■□□□□ 0.2
PDX1P52945 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.31■□□□□ 0.2
PDX1P52945 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.31■□□□□ 0.2
PDX1P52945 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.31■□□□□ 0.2
PDX1P52945 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PDX1P52945 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDX1P52945 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PDX1P52945 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDX1P52945 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.31■□□□□ 0.2
PDX1P52945 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDX1P52945 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PDX1P52945 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDX1P52945 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PDX1P52945 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDX1P52945 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PDX1P52945 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PDX1P52945 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDX1P52945 TFAMP1-201ENST00000412727 736 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms