Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ZNF259P1-201ENST00000407656 1365 ntBASIC16.7■□□□□ 0.26
ZNF140P52738 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF140P52738 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.7■□□□□ 0.26
ZNF140P52738 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF140P52738 RNU1-129P-201ENST00000384064 167 ntBASIC16.7■□□□□ 0.26
ZNF140P52738 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ZNF140P52738 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF140P52738 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF140P52738 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF140P52738 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.7■□□□□ 0.26
ZNF140P52738 U1.21-201ENST00000580816 167 ntBASIC16.7■□□□□ 0.26
ZNF140P52738 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF140P52738 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF140P52738 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF140P52738 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ZNF140P52738 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
ZNF140P52738 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF140P52738 ALOX12P2-203ENST00000570921 1945 ntBASIC16.7■□□□□ 0.26
ZNF140P52738 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF140P52738 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF140P52738 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF140P52738 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF140P52738 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF140P52738 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF140P52738 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
ZNF140P52738 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
ZNF140P52738 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ZNF140P52738 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.69■□□□□ 0.26
ZNF140P52738 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF140P52738 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.69■□□□□ 0.26
ZNF140P52738 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.69■□□□□ 0.26
ZNF140P52738 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ZNF140P52738 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF140P52738 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF140P52738 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF140P52738 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF140P52738 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ZNF140P52738 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF140P52738 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF140P52738 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 AC140113.2-201ENST00000604370 208 ntBASIC16.68■□□□□ 0.26
ZNF140P52738 AC023141.13-201ENST00000604991 943 ntBASIC16.68■□□□□ 0.26
ZNF140P52738 AL031055.1-201ENST00000606362 631 ntBASIC16.68■□□□□ 0.26
ZNF140P52738 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ZNF140P52738 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF140P52738 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF140P52738 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF140P52738 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF140P52738 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms