Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 AC006538.1-201ENST00000567905 1585 ntBASIC16.55■□□□□ 0.24
GTF2A1P52655 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.55■□□□□ 0.24
GTF2A1P52655 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.54■□□□□ 0.24
GTF2A1P52655 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.54■□□□□ 0.24
GTF2A1P52655 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
GTF2A1P52655 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
GTF2A1P52655 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.54■□□□□ 0.24
GTF2A1P52655 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.54■□□□□ 0.24
GTF2A1P52655 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.54■□□□□ 0.24
GTF2A1P52655 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
GTF2A1P52655 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GTF2A1P52655 AC027601.5-201ENST00000624065 2482 ntBASIC16.54■□□□□ 0.24
GTF2A1P52655 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
GTF2A1P52655 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.54■□□□□ 0.24
GTF2A1P52655 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
GTF2A1P52655 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
GTF2A1P52655 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.54■□□□□ 0.24
GTF2A1P52655 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.54■□□□□ 0.24
GTF2A1P52655 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.54■□□□□ 0.24
GTF2A1P52655 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.54■□□□□ 0.24
GTF2A1P52655 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.54■□□□□ 0.24
GTF2A1P52655 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.54■□□□□ 0.24
GTF2A1P52655 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
GTF2A1P52655 AC073869.1-201ENST00000415574 2762 ntBASIC16.54■□□□□ 0.24
GTF2A1P52655 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.54■□□□□ 0.24
GTF2A1P52655 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GTF2A1P52655 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.53■□□□□ 0.24
GTF2A1P52655 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.53■□□□□ 0.24
GTF2A1P52655 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
GTF2A1P52655 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.53■□□□□ 0.24
GTF2A1P52655 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.53■□□□□ 0.24
GTF2A1P52655 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.53■□□□□ 0.24
GTF2A1P52655 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.53■□□□□ 0.24
GTF2A1P52655 AC010491.1-201ENST00000563101 2797 ntBASIC16.53■□□□□ 0.24
GTF2A1P52655 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 AC006486.2-201ENST00000624246 2199 ntBASIC16.53■□□□□ 0.24
GTF2A1P52655 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GTF2A1P52655 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 SLC29A4P1-201ENST00000398760 971 ntBASIC16.53■□□□□ 0.24
GTF2A1P52655 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.53■□□□□ 0.24
GTF2A1P52655 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.53■□□□□ 0.24
GTF2A1P52655 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.53■□□□□ 0.24
GTF2A1P52655 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GTF2A1P52655 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.53■□□□□ 0.24
GTF2A1P52655 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.53■□□□□ 0.24
GTF2A1P52655 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GTF2A1P52655 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GTF2A1P52655 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GTF2A1P52655 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.53■□□□□ 0.24
GTF2A1P52655 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GTF2A1P52655 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.53■□□□□ 0.24
GTF2A1P52655 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GTF2A1P52655 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
GTF2A1P52655 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GTF2A1P52655 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GTF2A1P52655 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
GTF2A1P52655 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
GTF2A1P52655 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.52■□□□□ 0.24
GTF2A1P52655 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms