Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP9P49458 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP9P49458 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15□□□□□ -0.01
SRP9P49458 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.99□□□□□ -0.01
SRP9P49458 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SRP9P49458 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.99□□□□□ -0.01
SRP9P49458 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
SRP9P49458 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.99□□□□□ -0.01
SRP9P49458 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.99□□□□□ -0.01
SRP9P49458 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.99□□□□□ -0.01
SRP9P49458 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 RCN1P2-201ENST00000398357 915 ntBASIC14.99□□□□□ -0.01
SRP9P49458 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
SRP9P49458 IGHV3-52-201ENST00000519770 353 ntBASIC14.99□□□□□ -0.01
SRP9P49458 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.99□□□□□ -0.01
SRP9P49458 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.99□□□□□ -0.01
SRP9P49458 AC111152.3-201ENST00000569699 673 ntBASIC14.99□□□□□ -0.01
SRP9P49458 MIR5100-201ENST00000579544 119 ntBASIC14.99□□□□□ -0.01
SRP9P49458 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.99□□□□□ -0.01
SRP9P49458 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.99□□□□□ -0.01
SRP9P49458 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.99□□□□□ -0.01
SRP9P49458 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.99□□□□□ -0.01
SRP9P49458 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.99□□□□□ -0.01
SRP9P49458 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.99□□□□□ -0.01
SRP9P49458 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.99□□□□□ -0.01
SRP9P49458 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
SRP9P49458 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP9P49458 AC144831.1-201ENST00000573312 2656 ntBASIC14.99□□□□□ -0.01
SRP9P49458 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.98□□□□□ -0.01
SRP9P49458 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SRP9P49458 INTS4P1-201ENST00000438455 1935 ntBASIC14.98□□□□□ -0.01
SRP9P49458 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.98□□□□□ -0.01
SRP9P49458 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.98□□□□□ -0.01
SRP9P49458 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.98□□□□□ -0.01
SRP9P49458 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.98□□□□□ -0.01
SRP9P49458 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.98□□□□□ -0.01
SRP9P49458 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.98□□□□□ -0.01
SRP9P49458 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SRP9P49458 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.98□□□□□ -0.01
SRP9P49458 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SRP9P49458 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP9P49458 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SRP9P49458 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms