Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CX3CR1P49238 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.82□□□□□ -0.04
CX3CR1P49238 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CX3CR1P49238 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 AC091304.2-201ENST00000564639 760 ntBASIC14.82□□□□□ -0.04
CX3CR1P49238 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.82□□□□□ -0.04
CX3CR1P49238 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.82□□□□□ -0.04
CX3CR1P49238 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.82□□□□□ -0.04
CX3CR1P49238 TERC-201ENST00000602385 541 ntBASIC14.82□□□□□ -0.04
CX3CR1P49238 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
CX3CR1P49238 AL139424.1-201ENST00000607572 797 ntBASIC14.82□□□□□ -0.04
CX3CR1P49238 AL589182.2-201ENST00000619332 1049 ntBASIC14.82□□□□□ -0.04
CX3CR1P49238 AL355877.3-201ENST00000622820 899 ntBASIC14.82□□□□□ -0.04
CX3CR1P49238 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
CX3CR1P49238 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CX3CR1P49238 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.82□□□□□ -0.04
CX3CR1P49238 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.82□□□□□ -0.04
CX3CR1P49238 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.82□□□□□ -0.04
CX3CR1P49238 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CR1P49238 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CX3CR1P49238 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.81□□□□□ -0.04
CX3CR1P49238 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.81□□□□□ -0.04
CX3CR1P49238 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CX3CR1P49238 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.81□□□□□ -0.04
CX3CR1P49238 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.81□□□□□ -0.04
CX3CR1P49238 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.81□□□□□ -0.04
CX3CR1P49238 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.81□□□□□ -0.04
CX3CR1P49238 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.81□□□□□ -0.04
CX3CR1P49238 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.81□□□□□ -0.04
CX3CR1P49238 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.81□□□□□ -0.04
CX3CR1P49238 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CX3CR1P49238 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.81□□□□□ -0.04
CX3CR1P49238 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CX3CR1P49238 KRT8P49-201ENST00000604166 1432 ntBASIC14.81□□□□□ -0.04
CX3CR1P49238 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CX3CR1P49238 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.81□□□□□ -0.04
CX3CR1P49238 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CR1P49238 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.81□□□□□ -0.04
CX3CR1P49238 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.8□□□□□ -0.04
CX3CR1P49238 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.8□□□□□ -0.04
CX3CR1P49238 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.8□□□□□ -0.04
CX3CR1P49238 TSPY19P-201ENST00000418461 509 ntBASIC14.8□□□□□ -0.04
CX3CR1P49238 TSPY18P-201ENST00000441642 509 ntBASIC14.8□□□□□ -0.04
CX3CR1P49238 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CR1P49238 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.8□□□□□ -0.04
CX3CR1P49238 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.8□□□□□ -0.04
CX3CR1P49238 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CX3CR1P49238 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CR1P49238 SART3-203ENST00000546611 1184 ntBASIC14.8□□□□□ -0.04
CX3CR1P49238 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.8□□□□□ -0.04
CX3CR1P49238 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.8□□□□□ -0.04
CX3CR1P49238 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.8□□□□□ -0.04
CX3CR1P49238 AC139887.3-201ENST00000568585 713 ntBASIC14.8□□□□□ -0.04
CX3CR1P49238 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms