Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.36■□□□□ 0.21
KRT6CP48668 AL355877.3-201ENST00000622820 899 ntBASIC16.36■□□□□ 0.21
KRT6CP48668 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
KRT6CP48668 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6CP48668 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
KRT6CP48668 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6CP48668 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT6CP48668 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6CP48668 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
KRT6CP48668 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
KRT6CP48668 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
KRT6CP48668 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT6CP48668 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6CP48668 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.36■□□□□ 0.21
KRT6CP48668 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
KRT6CP48668 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
KRT6CP48668 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT6CP48668 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6CP48668 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6CP48668 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT6CP48668 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6CP48668 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 HLA-J-202ENST00000469281 1241 ntBASIC16.35■□□□□ 0.21
KRT6CP48668 KRT18P31-201ENST00000506277 1292 ntBASIC16.35■□□□□ 0.21
KRT6CP48668 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT6CP48668 AC139887.3-201ENST00000568585 713 ntBASIC16.35■□□□□ 0.21
KRT6CP48668 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT6CP48668 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6CP48668 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT6CP48668 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6CP48668 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
KRT6CP48668 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
KRT6CP48668 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6CP48668 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6CP48668 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6CP48668 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT6CP48668 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
KRT6CP48668 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT6CP48668 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT6CP48668 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT6CP48668 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT6CP48668 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.34■□□□□ 0.21
KRT6CP48668 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
KRT6CP48668 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6CP48668 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT6CP48668 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT6CP48668 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT6CP48668 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.33■□□□□ 0.21
KRT6CP48668 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
KRT6CP48668 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
KRT6CP48668 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT6CP48668 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT6CP48668 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT6CP48668 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT6CP48668 SCARNA2-201ENST00000458748 420 ntBASIC16.33■□□□□ 0.2
KRT6CP48668 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT6CP48668 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6CP48668 AC091304.2-201ENST00000564639 760 ntBASIC16.33■□□□□ 0.2
KRT6CP48668 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms