Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 AC009533.2-201ENST00000543664 586 ntBASIC14.87□□□□□ -0.03
SOX2P48431 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.87□□□□□ -0.03
SOX2P48431 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.87□□□□□ -0.03
SOX2P48431 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.87□□□□□ -0.03
SOX2P48431 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SOX2P48431 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.87□□□□□ -0.03
SOX2P48431 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.87□□□□□ -0.03
SOX2P48431 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SOX2P48431 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SOX2P48431 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SOX2P48431 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.87□□□□□ -0.03
SOX2P48431 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.87□□□□□ -0.03
SOX2P48431 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.87□□□□□ -0.03
SOX2P48431 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.87□□□□□ -0.03
SOX2P48431 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SOX2P48431 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.86□□□□□ -0.03
SOX2P48431 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.86□□□□□ -0.03
SOX2P48431 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.86□□□□□ -0.03
SOX2P48431 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.86□□□□□ -0.03
SOX2P48431 AC091607.1-201ENST00000490318 1060 ntBASIC14.86□□□□□ -0.03
SOX2P48431 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 AC011498.5-201ENST00000592027 486 ntBASIC14.86□□□□□ -0.03
SOX2P48431 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SOX2P48431 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 AC022188.1-201ENST00000620960 1664 ntBASIC14.86□□□□□ -0.03
SOX2P48431 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SOX2P48431 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX2P48431 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.85□□□□□ -0.03
SOX2P48431 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.85□□□□□ -0.03
SOX2P48431 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SOX2P48431 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SOX2P48431 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX2P48431 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 AC104076.2-201ENST00000448912 469 ntBASIC14.85□□□□□ -0.03
SOX2P48431 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.85□□□□□ -0.03
SOX2P48431 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.85□□□□□ -0.03
SOX2P48431 AC066615.1-201ENST00000640911 628 ntBASIC14.85□□□□□ -0.03
SOX2P48431 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX2P48431 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SOX2P48431 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SOX2P48431 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX2P48431 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX2P48431 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.85□□□□□ -0.03
SOX2P48431 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX2P48431 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms