Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.82■□□□□ 0.44
BRCC3P46736 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.82■□□□□ 0.44
BRCC3P46736 AC005498.2-205ENST00000593218 784 ntBASIC17.82■□□□□ 0.44
BRCC3P46736 AC013467.2-201ENST00000605472 835 ntBASIC17.82■□□□□ 0.44
BRCC3P46736 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.82■□□□□ 0.44
BRCC3P46736 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 AC084121.4-201ENST00000641598 221 ntBASIC17.82■□□□□ 0.44
BRCC3P46736 AF228730.8-201ENST00000642140 221 ntBASIC17.82■□□□□ 0.44
BRCC3P46736 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.82■□□□□ 0.44
BRCC3P46736 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.82■□□□□ 0.44
BRCC3P46736 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BRCC3P46736 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
BRCC3P46736 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
BRCC3P46736 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.81■□□□□ 0.44
BRCC3P46736 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 MIR346-201ENST00000362234 95 ntBASIC17.81■□□□□ 0.44
BRCC3P46736 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.81■□□□□ 0.44
BRCC3P46736 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.81■□□□□ 0.44
BRCC3P46736 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.81■□□□□ 0.44
BRCC3P46736 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.81■□□□□ 0.44
BRCC3P46736 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.81■□□□□ 0.44
BRCC3P46736 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.81■□□□□ 0.44
BRCC3P46736 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
BRCC3P46736 AC069262.1-201ENST00000539058 672 ntBASIC17.81■□□□□ 0.44
BRCC3P46736 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BRCC3P46736 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
BRCC3P46736 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.81■□□□□ 0.44
BRCC3P46736 AL390955.2-201ENST00000603032 514 ntBASIC17.81■□□□□ 0.44
BRCC3P46736 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.81■□□□□ 0.44
BRCC3P46736 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BRCC3P46736 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.81■□□□□ 0.44
BRCC3P46736 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.81■□□□□ 0.44
BRCC3P46736 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
BRCC3P46736 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.81■□□□□ 0.44
BRCC3P46736 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRCC3P46736 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.81■□□□□ 0.44
BRCC3P46736 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.8■□□□□ 0.44
BRCC3P46736 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 AC008677.1-201ENST00000519230 1561 ntBASIC17.8■□□□□ 0.44
BRCC3P46736 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.8■□□□□ 0.44
BRCC3P46736 AL512356.2-201ENST00000546955 174 ntBASIC17.8■□□□□ 0.44
BRCC3P46736 AC015911.4-201ENST00000588022 1070 ntBASIC17.8■□□□□ 0.44
BRCC3P46736 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.8■□□□□ 0.44
BRCC3P46736 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms