Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
USP8P40818 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP8P40818 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP8P40818 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP8P40818 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP8P40818 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.39■□□□□ 0.54
USP8P40818 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP8P40818 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
USP8P40818 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
USP8P40818 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
USP8P40818 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
USP8P40818 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
USP8P40818 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.39■□□□□ 0.53
USP8P40818 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 SART3-203ENST00000546611 1184 ntBASIC18.39■□□□□ 0.53
USP8P40818 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.39■□□□□ 0.53
USP8P40818 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.39■□□□□ 0.53
USP8P40818 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.39■□□□□ 0.53
USP8P40818 IFNL4P1-201ENST00000607083 540 ntBASIC18.39■□□□□ 0.53
USP8P40818 REXO1L6P-202ENST00000619970 1078 ntBASIC18.39■□□□□ 0.53
USP8P40818 AL139288.1-201ENST00000623748 933 ntBASIC18.39■□□□□ 0.53
USP8P40818 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.39■□□□□ 0.53
USP8P40818 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.39■□□□□ 0.53
USP8P40818 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.39■□□□□ 0.53
USP8P40818 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.39■□□□□ 0.53
USP8P40818 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP8P40818 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USP8P40818 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USP8P40818 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
USP8P40818 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
USP8P40818 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 RNF216P1-203ENST00000404404 2427 ntBASIC18.38■□□□□ 0.53
USP8P40818 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
USP8P40818 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.38■□□□□ 0.53
USP8P40818 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.38■□□□□ 0.53
USP8P40818 FGFR3P6-201ENST00000457012 610 ntBASIC18.38■□□□□ 0.53
USP8P40818 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.38■□□□□ 0.53
USP8P40818 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
USP8P40818 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USP8P40818 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.38■□□□□ 0.53
USP8P40818 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
USP8P40818 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.38■□□□□ 0.53
USP8P40818 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP8P40818 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
USP8P40818 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.37■□□□□ 0.53
USP8P40818 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
USP8P40818 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 AGGF1P2-201ENST00000426656 2106 ntBASIC18.37■□□□□ 0.53
USP8P40818 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
USP8P40818 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 AKR1C7P-201ENST00000305623 895 ntBASIC18.37■□□□□ 0.53
USP8P40818 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.37■□□□□ 0.53
USP8P40818 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
USP8P40818 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 PRYP5-201ENST00000451909 266 ntBASIC18.37■□□□□ 0.53
USP8P40818 SAPCD2P3-201ENST00000455031 850 ntBASIC18.37■□□□□ 0.53
USP8P40818 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 NCF1C-201ENST00000438382 1427 ntBASIC18.37■□□□□ 0.53
USP8P40818 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP8P40818 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
USP8P40818 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.37■□□□□ 0.53
USP8P40818 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
USP8P40818 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms