Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.16■□□□□ 0.02
SOX6P35712 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.16■□□□□ 0.02
SOX6P35712 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.16■□□□□ 0.02
SOX6P35712 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SOX6P35712 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.15■□□□□ 0.02
SOX6P35712 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.15■□□□□ 0.02
SOX6P35712 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SOX6P35712 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 AP002414.2-201ENST00000591780 3365 ntBASIC15.15■□□□□ 0.02
SOX6P35712 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.15■□□□□ 0.02
SOX6P35712 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.15■□□□□ 0.02
SOX6P35712 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 MYCLP1-201ENST00000372451 1075 ntBASIC15.15■□□□□ 0.02
SOX6P35712 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SOX6P35712 RBM17P1-201ENST00000453646 1190 ntBASIC15.15■□□□□ 0.02
SOX6P35712 AC097488.1-201ENST00000507834 756 ntBASIC15.15■□□□□ 0.02
SOX6P35712 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SOX6P35712 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.15■□□□□ 0.02
SOX6P35712 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.15■□□□□ 0.02
SOX6P35712 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.15■□□□□ 0.02
SOX6P35712 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SOX6P35712 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.15■□□□□ 0.02
SOX6P35712 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.15■□□□□ 0.02
SOX6P35712 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.15■□□□□ 0.02
SOX6P35712 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SOX6P35712 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SOX6P35712 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.15■□□□□ 0.02
SOX6P35712 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.15■□□□□ 0.02
SOX6P35712 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX6P35712 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX6P35712 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SOX6P35712 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.14■□□□□ 0.01
SOX6P35712 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX6P35712 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX6P35712 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.14■□□□□ 0.01
SOX6P35712 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.14■□□□□ 0.01
SOX6P35712 AL355075.4-201ENST00000554988 638 ntBASIC15.14■□□□□ 0.01
SOX6P35712 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.14■□□□□ 0.01
SOX6P35712 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.14■□□□□ 0.01
SOX6P35712 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.14■□□□□ 0.01
SOX6P35712 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SOX6P35712 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SOX6P35712 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SOX6P35712 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.14■□□□□ 0.01
SOX6P35712 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SOX6P35712 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 485.1 ms