Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC1P35251 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RFC1P35251 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC1P35251 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RFC1P35251 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC1P35251 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC1P35251 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC1P35251 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RFC1P35251 AC079328.2-201ENST00000561241 3354 ntBASIC17.74■□□□□ 0.43
RFC1P35251 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.74■□□□□ 0.43
RFC1P35251 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.74■□□□□ 0.43
RFC1P35251 AC006277.1-201ENST00000624348 1610 ntBASIC17.74■□□□□ 0.43
RFC1P35251 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.74■□□□□ 0.43
RFC1P35251 TPM4P1-201ENST00000436100 807 ntBASIC17.74■□□□□ 0.43
RFC1P35251 AC009078.2-202ENST00000463353 338 ntBASIC17.74■□□□□ 0.43
RFC1P35251 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.74■□□□□ 0.43
RFC1P35251 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.74■□□□□ 0.43
RFC1P35251 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.74■□□□□ 0.43
RFC1P35251 SLC25A6P4-201ENST00000586535 553 ntBASIC17.74■□□□□ 0.43
RFC1P35251 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.74■□□□□ 0.43
RFC1P35251 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFC1P35251 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.74■□□□□ 0.43
RFC1P35251 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.74■□□□□ 0.43
RFC1P35251 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.74■□□□□ 0.43
RFC1P35251 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFC1P35251 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 HLA-A-202ENST00000376806 1854 ntBASIC17.73■□□□□ 0.43
RFC1P35251 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RFC1P35251 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
RFC1P35251 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC1P35251 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFC1P35251 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.73■□□□□ 0.43
RFC1P35251 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC1P35251 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RFC1P35251 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.73■□□□□ 0.43
RFC1P35251 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.73■□□□□ 0.43
RFC1P35251 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RFC1P35251 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
RFC1P35251 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 AC092910.1-201ENST00000482027 1129 ntBASIC17.73■□□□□ 0.43
RFC1P35251 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.73■□□□□ 0.43
RFC1P35251 AC107918.2-201ENST00000530817 355 ntBASIC17.73■□□□□ 0.43
RFC1P35251 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
RFC1P35251 AC013467.2-201ENST00000605472 835 ntBASIC17.73■□□□□ 0.43
RFC1P35251 AC117500.6-201ENST00000624871 588 ntBASIC17.73■□□□□ 0.43
RFC1P35251 AC005593.1-201ENST00000624894 515 ntBASIC17.73■□□□□ 0.43
RFC1P35251 PGM5P2-202ENST00000637225 1043 ntBASIC17.73■□□□□ 0.43
RFC1P35251 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFC1P35251 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC1P35251 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
RFC1P35251 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC1P35251 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFC1P35251 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC1P35251 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFC1P35251 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFC1P35251 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.72■□□□□ 0.43
RFC1P35251 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RFC1P35251 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.72■□□□□ 0.43
RFC1P35251 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RFC1P35251 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.72■□□□□ 0.43
RFC1P35251 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.72■□□□□ 0.43
RFC1P35251 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.72■□□□□ 0.43
RFC1P35251 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFC1P35251 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC1P35251 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.72■□□□□ 0.43
RFC1P35251 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RFC1P35251 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.72■□□□□ 0.43
RFC1P35251 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.72■□□□□ 0.43
RFC1P35251 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.72■□□□□ 0.43
RFC1P35251 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms