Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPA3P35244 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPA3P35244 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RPA3P35244 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RPA3P35244 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.04■□□□□ 0.32
RPA3P35244 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RPA3P35244 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 INTS4P1-201ENST00000438455 1935 ntBASIC17.04■□□□□ 0.32
RPA3P35244 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPA3P35244 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPA3P35244 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPA3P35244 MTHFR-217ENST00000641820 1569 ntBASIC17.04■□□□□ 0.32
RPA3P35244 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPA3P35244 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
RPA3P35244 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.04■□□□□ 0.32
RPA3P35244 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.04■□□□□ 0.32
RPA3P35244 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 AC012313.10-201ENST00000623509 926 ntBASIC17.04■□□□□ 0.32
RPA3P35244 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RPA3P35244 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.04■□□□□ 0.32
RPA3P35244 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.04■□□□□ 0.32
RPA3P35244 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPA3P35244 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.04■□□□□ 0.32
RPA3P35244 ME2P1-201ENST00000426028 1970 ntBASIC17.04■□□□□ 0.32
RPA3P35244 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPA3P35244 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RPA3P35244 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RPA3P35244 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPA3P35244 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RPA3P35244 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RPA3P35244 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RPA3P35244 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RPA3P35244 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.03■□□□□ 0.32
RPA3P35244 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.03■□□□□ 0.32
RPA3P35244 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.03■□□□□ 0.32
RPA3P35244 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.03■□□□□ 0.32
RPA3P35244 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RPA3P35244 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.03■□□□□ 0.32
RPA3P35244 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.03■□□□□ 0.32
RPA3P35244 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 AC091304.2-201ENST00000564639 760 ntBASIC17.03■□□□□ 0.32
RPA3P35244 LINC01711-201ENST00000598340 967 ntBASIC17.03■□□□□ 0.32
RPA3P35244 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RPA3P35244 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RPA3P35244 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.03■□□□□ 0.32
RPA3P35244 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPA3P35244 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.03■□□□□ 0.32
RPA3P35244 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RPA3P35244 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.02■□□□□ 0.32
RPA3P35244 AC009336.1-201ENST00000608941 1553 ntBASIC17.02■□□□□ 0.32
RPA3P35244 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
RPA3P35244 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RPA3P35244 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPA3P35244 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RPA3P35244 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPA3P35244 TUBB8P12-201ENST00000308911 1335 ntBASIC17.02■□□□□ 0.32
RPA3P35244 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPA3P35244 TUBB7P-202ENST00000428444 1305 ntBASIC17.02■□□□□ 0.32
RPA3P35244 TUBB8P7-204ENST00000567960 1332 ntBASIC17.02■□□□□ 0.32
RPA3P35244 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.02■□□□□ 0.32
RPA3P35244 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RPA3P35244 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPA3P35244 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPA3P35244 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPA3P35244 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.02■□□□□ 0.32
RPA3P35244 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPA3P35244 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RPA3P35244 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms