Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.15□□□□□ -0.15
LMO1P25800 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO1P25800 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LMO1P25800 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.14□□□□□ -0.15
LMO1P25800 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO1P25800 ELK2BP-201ENST00000415014 1224 ntBASIC14.14□□□□□ -0.15
LMO1P25800 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.14□□□□□ -0.15
LMO1P25800 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LMO1P25800 AL121912.1-201ENST00000603683 238 ntBASIC14.14□□□□□ -0.15
LMO1P25800 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LMO1P25800 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LMO1P25800 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LMO1P25800 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO1P25800 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO1P25800 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
LMO1P25800 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LMO1P25800 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO1P25800 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO1P25800 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.14□□□□□ -0.15
LMO1P25800 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO1P25800 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO1P25800 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LMO1P25800 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
LMO1P25800 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LMO1P25800 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.13□□□□□ -0.15
LMO1P25800 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 RPS2P1-201ENST00000434010 821 ntBASIC14.13□□□□□ -0.15
LMO1P25800 EMBP1-201ENST00000458200 901 ntBASIC14.13□□□□□ -0.15
LMO1P25800 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.13□□□□□ -0.15
LMO1P25800 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 RPS15P9-201ENST00000494093 319 ntBASIC14.13□□□□□ -0.15
LMO1P25800 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LMO1P25800 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.13□□□□□ -0.15
LMO1P25800 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.13□□□□□ -0.15
LMO1P25800 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.13□□□□□ -0.15
LMO1P25800 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 MIR4492-201ENST00000581627 80 ntBASIC14.13□□□□□ -0.15
LMO1P25800 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.13□□□□□ -0.15
LMO1P25800 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.13□□□□□ -0.15
LMO1P25800 TP73-AS1-207ENST00000624167 988 ntBASIC14.13□□□□□ -0.15
LMO1P25800 PGM5P2-202ENST00000637225 1043 ntBASIC14.13□□□□□ -0.15
LMO1P25800 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.13□□□□□ -0.15
LMO1P25800 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO1P25800 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LMO1P25800 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO1P25800 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LMO1P25800 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO1P25800 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LMO1P25800 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms