Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPA1P20036 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.99■□□□□ 0.31
HLA-DPA1P20036 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPA1P20036 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 HCG4-201ENST00000418983 998 ntBASIC16.97■□□□□ 0.31
HLA-DPA1P20036 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.97■□□□□ 0.31
HLA-DPA1P20036 AP001350.2-201ENST00000625104 1094 ntBASIC16.97■□□□□ 0.31
HLA-DPA1P20036 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 SLC22A20-204ENST00000530038 1673 ntBASIC16.97■□□□□ 0.31
HLA-DPA1P20036 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 HLA-A-202ENST00000376806 1854 ntBASIC16.97■□□□□ 0.31
HLA-DPA1P20036 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DPA1P20036 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 PMS2P1-201ENST00000431037 1228 ntBASIC16.96■□□□□ 0.31
HLA-DPA1P20036 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 VN2R19P-201ENST00000442399 1052 ntBASIC16.96■□□□□ 0.31
HLA-DPA1P20036 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPA1P20036 AC087641.1-201ENST00000557561 1021 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms